mmm.... I'd try booting into the recovery console and run a check disk from there.
http://support.microsoft.com/kb/314058/
Once into the recovery console, run the command:
chkdsk
And that should check the disk for errors.
To repair and fix any errors use the:
chkdsk /R /F
http://www.pegasus-afs.com/eSupport/using_CHKDSK.htm
Try that first and see if you can get rid of the errors related to chkdsk...
Disk errors can be indicative of a failing hard drive... (just to be safe I would back up anything very important)... but it's probably not failing!
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